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11 stars written in C
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Zstandard - Fast real-time compression algorithm

C 26,948 2,457 Updated Apr 1, 2026

A fast image processing library with low memory needs.

C 11,223 755 Updated Apr 9, 2026

MMseqs2: ultra fast and sensitive search and clustering suite

C 2,021 281 Updated Apr 4, 2026

Inference of ploidy and heterozygosity structure using whole genome sequencing data

C 292 28 Updated Feb 25, 2026

Benchmarking programming languages/implementations for common tasks in Bioinformatics

C 184 29 Updated Dec 9, 2021

A fast K-mer counter for high-fidelity shotgun datasets

C 142 19 Updated Jan 19, 2026

Identify long STRs, VNTRs, satellite DNA and other low-complexity regions in a genome

C 91 4 Updated Jan 28, 2026

FastK based version of Merqury

C 33 5 Updated Jan 19, 2026

Paired REad TEXTure Mapper. Converts SAM formatted read pairs into genome contact maps.

C 26 4 Updated Mar 27, 2026

1-code framework: docs, C-library, and tools

C 25 6 Updated Apr 2, 2026

iRODS client programs and API

C 20 20 Updated Apr 1, 2026