c2tk is a dockerized environment to run psi4 with qcengine, gpaw and orca with ase:
python 3.9- source build:
libvdwxc-0.4.0 - latest packages from pypi:
python-dotenv,loguruase,gpaw,rdkit-pypinetworkx,matplotlib,nglview
- install support for
orca-5.0.2(if you download the binary from the official site)
-
clone repo
-
download orca 5.0.2
ORCA is free only for academic use
register here and go downloads.
clickORCA 5.0.2post and chooseORCA 5.0.2, Linux, x86-64, shared-version, .tar.xz Archive.
cd c2tk
mkdir .downloads
cp <your-download-path>/orca_5_0_2_linux_x86-64_shared_openmpi411.tar.xz .downloads
- build image
./c2tk bulid
Basically you can use docker and docker compose commands. We provide a script ./c2tk for your convenience.
./c2tk help
run c2tk container
./c2tk up
within ~1 minutes Jupyter notebook server will be ready.
you can connect to the server via http://localhost:8989 .
The default password is Passw0rd!.
run c2tk shell
./c2tk bash
The default working dir is /c2tk.
You can try to run nwchem_openmpi or /opt/orca501/orca.
run ipython shell
./c2tk ipython
or run your python scripts
./c2tk python examples/test.py
./c2tk down
@software{Baik_C2TK_Computational_Chemistry_2021,
title = {{C2TK: Computational Chemistry Toolkit}},
author = {Baik, Jinserk},
doi = {10.5281/zenodo.5574254},
url = {https://github.com/jinserk/c2tk.git},
version = {0.0.1},
month = {10},
year = {2021}
}