Stars
A porous multiphase toolbox for OpenFOAM
newbthenewbd / tumorcode
Forked from jacob-evarts/tumorcodeSimulation of Vascularized Tumors including Angiogenesis, Oxygen, Drugs and Interstitial Fluid
jacob-evarts / tumorcode
Forked from thierry3000/tumorcodeSimulation of Vascularized Tumors including Angiogenesis, Oxygen, Drugs and Interstitial Fluid
A c++ wrapper of the numpy c-api. Based on boost::python.
Romain-Enjalbert / vmtk
Forked from vmtk/vmtkthe Vascular Modeling Toolkit
A Python program to Perform Calculations Associated with a Grid Convergence Study
Collection of information shared by PhET team members for the purpose of using github effectively and for other process-related topics.
Simulation of Vascularized Tumors including Angiogenesis, Oxygen, Drugs and Interstitial Fluid
Jupyter metapackage for installation and documentation
An open-source application for biological image analysis
files and instructions for creating and using example containers from the sylabs.io blog
Official code repository for the PhysiCell-EMEWS project
Some useful scripts, mostly Python, primarily for PhysiCell
A list of synthetic dataset and tools for computer vision
RadIO is a library for data science research of computed tomography imaging
Software to generate 2D/3D/4D analytical phantoms and their Radon transforms (parallel beam) for image processing
PhysiCell: Scientist end users should use latest release! Developers please fork the development branch and submit PRs to the dev branch. Thanks!
Classification of Lung cancer slide images using deep-learning
Analogue of the scale-invariant feature transform (SIFT) for three-dimensional images. Includes an image processing and linear algebra library with feature matching and RANSAC regression. Also incl…
dcmqi (DICOM for Quantitative Imaging) is a C++ library for conversion between imaging research formats and the standard DICOM representation for image analysis results
Cancer metastasis detection with neural conditional random field (NCRF)
An easy to use framework to build Nested Containerized Workflows
Import a CWL workflow specification to Nextflow script (experimental)