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Starred repositories

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Open-source device for measuring cardiograpgy signals with a GUI for easier handling and additional software for analyzing the data.

Jupyter Notebook 303 33 Updated Sep 15, 2025

bluetooth mesh chat, IRC vibes

Swift 23,220 2,152 Updated Nov 2, 2025

An LLM-powered knowledge curation system that researches a topic and generates a full-length report with citations.

Python 27,578 2,500 Updated Sep 30, 2025

A comparative genomics workflow using Nextflow, conda, Julia and R

Nextflow 48 8 Updated Apr 24, 2024

Stuff to do with HiC data

Python 5 10 Updated Dec 19, 2018

get things from one computer to another, safely

Python 21,921 712 Updated Oct 30, 2025

Play chess with your friend on terminal

Go 68 2 Updated Jun 23, 2021

SSR Based Comparitive Genomics API

Python 3 Updated Sep 24, 2025

Foreign Contamination Screening caller scripts and documentation

149 20 Updated Mar 18, 2025
R 14 5 Updated Jun 14, 2025

Automated pipeline for enrichment analysis in non-model organisms !

HTML 9 3 Updated Jun 14, 2025

B-cell Hybrid Immune Variant Engine

R 11 4 Updated Aug 18, 2025

A visualization tool for studying chromosomal rearrangements through interactive synteny block analysis and chromosome breakpoint mapping.

TypeScript 9 2 Updated Aug 7, 2025

Open Source Alternative to Vercel, Netlify and Heroku.

TypeScript 26,378 1,718 Updated Nov 3, 2025

Creating beautiful plots of data maps

Python 948 68 Updated Oct 11, 2025

real time face swap and one-click video deepfake with only a single image

Python 75,265 10,950 Updated Nov 5, 2025

A list of Free Software network services and web applications which can be hosted on your own servers

256,513 11,843 Updated Nov 5, 2025

A Nextflow pipeline for evaluating assembly quality

Nextflow 38 8 Updated Oct 16, 2025

⚡️ 🧬 Fulgor is a fast and space-efficient colored de Bruijn graph index.

C++ 55 14 Updated Nov 3, 2025

Metagenomic binning based on Hi-C data

Python 28 9 Updated Aug 7, 2025

High performance self-hosted photo and video management solution.

TypeScript 83,517 4,380 Updated Nov 5, 2025

☁️ The Most Secure and Easy Selfhosted Home Server. Take control of your data and privacy without sacrificing security and stability (Authentication, anti-DDOS, anti-bot)

JavaScript 5,225 184 Updated Nov 5, 2025

Tools for working with agp files

Python 18 3 Updated Jun 26, 2025

Biological foundation modeling from molecular to genome scale

Jupyter Notebook 1,436 177 Updated Sep 22, 2025

Materials for genome annotation sessions at the WORKSHOP ON GENOMICS, CESKY KRUMLOV

Jupyter Notebook 16 6 Updated Jan 9, 2025

Scalable annotated de Bruijn graphs for DNA indexing, alignment, and assembly

C++ 188 22 Updated Nov 4, 2025

BBFetch is a powerful shell script designed to facilitate the batch downloading of genomic data using ncbi-datasets

Shell 10 Updated May 6, 2024

Python interface for the RCSB PDB search API.

Python 65 3 Updated Mar 26, 2025

An R package to infer and analyze synteny networks from protein sequences

R 34 6 Updated Jul 23, 2025
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