Highly parallelised multi-taxonomic profiling of shotgun short- and long-read metagenomic data

RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.

Software for painlessly estimating average nucleotide diversity within and between populations

Phylogenetic orthology inference for comparative genomics

Nextflow pipeline for microbiome–transcriptome integration

Shared repository for preparation of cannabis pangenome figures and documents

Fast, accurate and scalable normalization for RNA sequencing data with the RUVprps software package.

Multi-genotype analyses of long-ncRNAs in Sugarcane

❗ This is a read-only mirror of the CRAN R package repository. statGraph — Statistical Methods for Graphs. Homepage: https://www.ime.usp.br/~fujita/software.html