Stars
Textbook for NESC 3505, Neural Data Science, at Dalhousie University
A matlab GUI for dendritic and spine imaging analysis
A Python 3 toolbox for neural receptive field estimation using splines and Gaussian priors.
Some examples for the use of boost::python
Matplotlib styles for scientific plotting
Learning Convolutional Neural Networks with Interactive Visualization.
Kalman Filter book using Jupyter Notebook. Focuses on building intuition and experience, not formal proofs. Includes Kalman filters,extended Kalman filters, unscented Kalman filters, particle filte…
Probabilistic numerics for common neuroscience models.
Code etc. for CBC inference paper of Oesterle el al. 2020
sbi is a Python package for simulation-based inference, designed to meet the needs of both researchers and practitioners. Whether you need fine-grained control or an easy-to-use interface, sbi has …
cell detection in calcium imaging recordings
QDSpy - a Python software for scripting and presenting stimuli for visual neuroscience.
Relational data pipelines for the science lab
Figure sizes, font sizes, fonts, and more configurations at minimal overhead. Fix your journal papers, conference proceedings, and other scientific publications.
Uncertainpy: a Python toolbox for uncertainty quantification and sensitivity analysis, tailored towards computational neuroscience.