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rpvg Public
Method for inferring path posterior probabilities and abundances from pangenome graph read alignments
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tools for working with genome variation graphs
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hprc-rnaseq-analyses-scripts Public
Scripts used for the RNA-seq analyses in the HPRC draft pangenome paper.
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git-github-workshop-team1 Public
HeaDS git and GitHub workshop 2023 (team 1)
MIT License UpdatedJan 9, 2023 -
vgrna-project-paper Public
Bash scripts and data used in pantranscriptomic paper
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vgrna-project-scripts Public
Scripts used for pantranscriptome analyses
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s3script-dockerfiles Public
Dockerfiles for running code using scripts stored in AWS s3
Dockerfile MIT License UpdatedOct 5, 2022 -
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libvgio Public
Forked from vgteam/libvgioA dynamic library that provides io for the vg toolkit.
C++ Other UpdatedOct 22, 2021 -
bioinformatics-diagrams Public
Diagrams created for explaining bioinformatics concepts and methods in presentations
MIT License UpdatedApr 1, 2021 -
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BayesTyper Public
Forked from bioinformatics-centre/BayesTyperA method for variant graph genotyping based on exact alignment of k-mers
C++ UpdatedMar 13, 2019
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