SED-ML library based on libSBML

Methylation (Bisulfite-Sequencing) analysis pipeline using Bismark or bwa-meth + MethylDackel

Metadata and website for the Open Bio Ontologies Foundry Ontology Registry

OpenCOR is a cross-platform modelling environment, which can be used to organise, edit, simulate and analyse CellML files.

Nicotinic control of dopamine release in nucleus accumbens (Maex et al. 2014)

How adaptation makes low firing rates robust (Sherman & Ha 2017)

Control of vibrissa motoneuron firing (Harish and Golomb 2010)

Persistent Spiking in ACC Neurons (Ratte et al 2018)

ClC-2 channels regulate neuronal excitability, not intracellular Cl- levels (Ratte & Prescott 2011)

Simulation of calcium signaling in fine astrocytic processes (Denizot et al 2019)

Activity patterns in a subthalamopallidal network of the basal ganglia model (Terman et al 2002)

Reliability of Morris-Lecar neurons with added T, h, and AHP currents (Zeldenrust et al. 2013)

Inhibitory control of motoneuron excitability (Venugopal et al 2011)

Networks of spiking neurons: a review of tools and strategies (Brette et al. 2007)

Quickly rewrite git repository history (filter-branch replacement)

Criticality,degeneracy in injury-induced changes in primary afferent excitability (Ratte et al 2014)

Respiratory central pattern generator (mammalian brainstem) (Rubin & Smith 2019)

Anoxic depolarization, recovery: effect of brain regions and extracellular space (Hubel et al. 2016)

A Computational Model of Bidirectional Plasticity Regulation by betaCaMKII (Pinto et al. 2019)

Action potential of striated muscle fiber (Adrian et al 1970)

The role of glutamate in neuronal ion homeostasis: spreading depolarization (Hubel et al 2017)

Pallidostriatal projections promote beta oscillations (Corbit, Whalen, et al 2016)

Roles of I(A) and morphology in AP prop. in CA1 pyramidal cell dendrites (Acker and White 2007)

Model of DARPP-32 phosphorylation in striatal medium spiny neurons (Lindskog et al. 2006)

Hodgkin-Huxley with dynamic ion concentrations (Hubel and Dahlem, 2014)

Prediction for the presence of voltage-gated Ca2+ channels in myelinated central axons (Brown 2003)

Effect of trp-like current on APs during exposure to sinusoidal voltage (Chen et al. 2010)

PreBotzinger Complex inspiratory neuron with NaP and CAN currents (Park and Rubin 2013)

Markovian model for SCN8A-encoded channel (Kuo et al 2020)

Spike trains in Hodgkin–Huxley model and ISIs of acupuncture manipulations (Wang et al. 2008)