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Offline till March 2025; Remind me if I don't respond
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Offline till March 2025; Remind me if I don't respond

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@borevitzlab @biocore @BioJulia @biospectrabysequencing @COMBINE-Canberra @bioconda @IWYP60 @plantimmunity

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45 results for forked starred repositories
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The x86 processor fuzzer

Python 5,003 352 Updated Feb 20, 2024

The personal, minimalist, super-fast, database free, bookmarking service - community repo

PHP 3,790 304 Updated Feb 1, 2026

The Levenshtein Python C extension module contains functions for fast computation of Levenshtein distance and string similarity

C 1,277 158 Updated Aug 11, 2021

Cython implementation of Toolz: High performance functional utilities

Python 1,101 75 Updated Dec 1, 2025

A Variant Call Format reader for Python.

Python 418 199 Updated Sep 22, 2023

Learn how to use scholarly markdown

TeX 413 38 Updated Jul 22, 2014

Linux KMS/DRM based virtual Console Emulator

C 307 34 Updated Jan 26, 2026

Declarative statistical visualization library for Python

Python 237 18 Updated Oct 11, 2018

Convenient unit testing framework for the C programming language.

C 168 8 Updated Jan 25, 2021

Linear mixed model for genomic analyses.

Python 118 30 Updated May 21, 2021

A library for extracting tables from PDF files

Python 89 34 Updated Sep 27, 2013
C 84 27 Updated Jan 25, 2025

hifiasm_meta - de novo metagenome assembler, based on hifiasm, a haplotype-resolved de novo assembler for PacBio Hifi reads.

C++ 69 8 Updated Nov 24, 2025

Secretgrind: a Valgrind analysis tool to detect secrets in memory

C 61 4 Updated Jan 16, 2017

Rmarkdown support for vim

Vim Script 60 9 Updated Jan 27, 2026

UCSC Nanopore

Python 44 13 Updated Aug 11, 2019

Assembler for raw de novo genome assembly of long uncorrected reads.

Python 35 4 Updated Dec 11, 2019

tiny HTTP parser written in C (used in HTTP::Parser::XS et al.)

C 19 2 Updated Dec 18, 2014

A ggplot2 based biplot for principal components-like methods

HTML 13 Updated Sep 16, 2025

ESP32-optimized variant of the Tamp lossless compression library.

Python 11 Updated Jan 5, 2026

A pipeline for extracting SSU rRNA gene from wgs data and applying them for further diversity analysis

Jupyter Notebook 10 1 Updated Jan 30, 2016

Spaced seed version of Kraken taxonomic sequence classification system

C++ 9 Updated Jun 3, 2016

List of single-file C/C++ libraries.

7 Updated Jul 9, 2017

Command line interface to and serialization format for Blosc

Python 7 2 Updated Mar 11, 2021

Parasite Symbiont Transcriptome Separation

Python 6 1 Updated Jul 25, 2015

cwl2zshcomp generates ZSH auto completions

Python 5 Updated Feb 17, 2017

Inspect kallisto RNA-Seq output

R 4 Updated Nov 4, 2015

A stable place for guidance source code http://guidance.tau.ac.il/ver2/source.php

C++ 3 Updated Nov 21, 2017

Bioinformatics and Computational Biology Infrastructure for Julia

Julia 3 Updated Jun 10, 2017
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