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Static memory-efficient Trie-like structures for Python based on marisa-trie C++ library.
Pysam is a Python package for reading, manipulating, and writing genomics data such as SAM/BAM/CRAM and VCF/BCF files. It's a lightweight wrapper of the HTSlib API, the same one that powers samtool…
netcdf4-python: python/numpy interface to the netCDF C library
Fast, efficiently stored Trie for Python. Uses libdatrie.
Toolkit for calling structural variants using short or long reads