The COVID-19 Canada Open Data Working Group is collecting publicly available information on confirmed and presumptive positive cases during the ongoing COVID-19 outbreak in Canada. Data are entered in a spreadsheet with each line representing a unique case, including age, sex, health region location, and history of travel where available. Sources are included as a reference for each entry. All data are exclusively collected from publicly available sources including government reports and news media. We aim to continue making updates daily.
We want to thank all individuals and organizations across Canada who have been willing and able to report data in as open and timely a manner as possible.
Please see below for a recommended citation of this dataset. A number of individuals have contributed to the specific data added here and their names and details are listed below, as well as in the contributors tab of the spreadsheet.
Berry I, Soucy J-PR, Tuite A, Fisman D. Open access epidemiologic data and an interactive dashboard to monitor the COVID-19 outbreak in Canada. CMAJ. 2020 Apr 14;192(15):E420. doi: https://doi.org/10.1503/cmaj.75262
The line list of cases is posted and updated at: https://docs.google.com/spreadsheets/d/1D6okqtBS3S2NRC7GFVHzaZ67DuTw7LX49-fqSLwJyeo/edit?usp=sharing (direct download link).
The full data may be downloaded in a machine-readable format directly from this repository.
- Codebook: codebook.csv
- Cases: cases.csv
- Mortality: mortality.csv
- Date and time of update: update_time.txt
- Daily and cumulative cases: timeseries_hr/cases_timeseries_hr.csv
- Daily and cumulative mortality: timeseries_hr/mortality_timeseries_hr.csv
- Daily and cumulative cases: timeseries_prov/cases_timeseries_prov.csv
- Daily and cumulative mortality: timeseries_prov/mortality_timeseries_prov.csv
- Daily and cumulative recovered: timeseries_prov/recovered_timeseries_prov.csv
- Daily and cumulative testing: timeseries_prov/testing_timeseries_prov.csv
- Current and change in active cases: timeseries_prov/active_timeseries_prov.csv
- Daily and cumulative cases: timeseries_canada/cases_timeseries_canada.csv
- Daily and cumulative mortality: timeseries_canada/mortality_timeseries_canada.csv
- Daily and cumulative recovered: timeseries_canada/recovered_timeseries_canada.csv
- Daily and cumulative testing: timeseries_canada/testing_timeseries_canada.csv
- Current and change in active cases: timeseries_canada/active_timeseries_canada.csv
- Correspondence between health region names used in our dataset and HRUID values given in Esri Canada's health region map, with 2018 population values: other/hr_map.csv
- Correspondence between ages given in the individual-level case data and age groups displayed on the data dashboard: other/age_map_cases.csv
- Data update (script used to prepare the data update each day): scripts/data_update.R
- Data update validation (script used to help check the data update each day prior to release): scripts/data_update_validation.R
We have also created an interactive dashboard for up-to-date visual analytics and epidemiological analyses.
This is available for public use at: https://art-bd.shinyapps.io/covid19canada/
Our data collection methodology as well as specific notes about the data are listed on the "About the data" tab on our dashboard.
| Name | Role | Organization | ||
|---|---|---|---|---|
| Isha Berry | Founder | University of Toronto | isha.berry@mail.utoronto.ca | @ishaberry2 |
| Jean-Paul R. Soucy | Founder | University of Toronto | jeanpaul.soucy@mail.utoronto.ca | @JPSoucy |
| Meghan O'Neill | Data Lead | University of Toronto | meghan.oneill@utoronto.ca | @_MeghanONeill |
| Shelby Sturrock | Data Lead | University of Toronto | shelby.sturrock@mail.utoronto.ca | @shelbysturrock |
| James E. Wright | Data Lead | SickKids | jamese.wright@sickkids.ca | @JWright159 |
| Kamal Acharya | Contributor | University of Guelph | acharyak@uoguelph.ca | @Kamalraj_ach |
| Gabrielle Brankston | Contributor | University of Guelph | brankstg@uoguelph.ca | @GBrankston |
| Vinyas Harish | Contributor | University of Toronto | v.harish@mail.utoronto.ca | @VinyasHarish |
| Kathy Kornas | Contributor | University of Toronto | kathy.kornas@utoronto.ca | |
| Thivya Naganathan | Contributor | University of Guelph | tnaganat@uoguelph.ca | |
| Lindsay Obress | Contributor | University of Guelph | lobress@uoguelph.ca | |
| Tanya Rossi | Contributor | University of Guelph | rossit@uoguelph.ca | @DrTanyaRossi |
| Alison Simmons | Contributor | University of Toronto | alison.simmons@mail.utoronto.ca | @alisonesimmons |
| Matthew Van Camp | Contributor | University of Guelph | vancampm@uoguelph.ca | |
| Wendy Xie | Contributor | University of Guelph | xxie03@uoguelph.ca | @XiaotingXie |
| Nika Maani | Contributor | University of Toronto | nika.maani@mail.utoronto.ca |