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Exploring geometry of sample representations

Status: Open.

#139 In lueckenlab/patpy;

· lordy5 opened on May 4, 2026

Massive longitudinal aging dataset use case

Status: Open.

#138 In lueckenlab/patpy;

· kylekimler opened on May 4, 2026

Agent support

Status: Open.

#137 In lueckenlab/patpy;

· benjaminfreyuu opened on May 4, 2026

Differential analysis: full factorial model with interaction terms

Status: Open.

#135 In lueckenlab/patpy;

· LArnoldt opened on May 4, 2026

Housekeeping

Status: Open.

#134 In lueckenlab/patpy;

· VladimirShitov opened on May 3, 2026

Add more datasets and use cases

Status: Open.

#133 In lueckenlab/patpy;

· VladimirShitov opened on May 3, 2026

Rheumatoid arthritis onset prediction

Status: Open.

#132 In lueckenlab/patpy;

· VladimirShitov opened on May 3, 2026

Add a use case for predicting vaccine responce from PBMC data

Status: Open.

#131 In lueckenlab/patpy;

· VladimirShitov opened on May 3, 2026

Add new sample representation methods to the interface

Status: Open.

#130 In lueckenlab/patpy;

· VladimirShitov opened on May 3, 2026

Add scSLIDE to the sample representation methods

enhancementNew feature or requestNew feature or request

Status: Open.

#118 In lueckenlab/patpy;

· VladimirShitov opened on Dec 17, 2025

calculate_distance_matrix fails with sparse AnnData.X

bugSomething isn't workingSomething isn't working

Status: Open.

#116 In lueckenlab/patpy;

· LArnoldt opened on Dec 10, 2025

Try celllink's DonorData as a data structure

enhancementNew feature or requestNew feature or request

Status: Open.

#115 In lueckenlab/patpy;

· VladimirShitov opened on Nov 14, 2025