© (2014-2018) L. Deecke and H. Dobrovolny.

Published in "Intermittent Treatment of Influenza", Journal of Theoretical Biology (2018).

Required: CMake (2.8.9) and boost/program_options (0.24.1).

The following code provides the building block that is used to study the dynamics in an influenza A infection. A two-cell model (that is mathematically realized through a stochastic system of differential equations) is parametrized via 29 unique parameters that are passed to the program (at runtime) in a user-editable config file. The program allows researchers to simulate pharmaceutical treatment schemes commonly used in the curing of an influenza infection in an easy manner and at short execution times.

Usage:

1. Create and navigate into a directory build.
2. Execute CMake via cmake .. and then make.
3. Navigate back to the root directory, edit config.ini and execute build/influenza.
4. Viral titer curves are written into out.dat.