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Generate Novel Insights from Gene Correlation Data
ClassifyCNV: a tool for clinical annotation of copy-number variants
knowledge-based genotyping of cancer hotspots from the tumor BAM files
An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)
Analysis pipeline for cancer sequencing data
Diffusion Bee is the easiest way to run Stable Diffusion locally on your M1 Mac. Comes with a one-click installer. No dependencies or technical knowledge needed.
📄 Awesome CV is LaTeX template for your outstanding job application
Genomic Identification of Significant Targets in Cancer (GISTIC), version 2
CoMut is a Python library for visualizing genomic and phenotypic information via comutation plots
Differential analysis for ChIP-seq with biological replicates
Python deployment tool for bespoke image curation projects, oriented toward scientific projects. Please cite https://academic.oup.com/gigascience/article/7/7/giy064/5026174
A unified interface to immune deconvolution methods (CIBERSORT, EPIC, quanTIseq, TIMER, xCell, MCPcounter) and mouse deconvolution methods
This is the Gviz development repository. Gviz plots data and annotation information along genomic coordinates.
Genome-scale design tool for oligo hybridization probes
Merging, Annotation, Validation, and Illustration of Structural variants
🧬 gget enables efficient querying of genomic reference databases
Data availability and bioinformatics data analyses - Seczynska M. et al., 2021
EasyFuse is a pipeline for accurate fusion gene detection from RNA-seq data.
a python extension of CNVnator -- a tool for CNV analysis from depth-of-coverage by mapped reads
Install GISTIC2 by one line code; GISTIC2 docker image
An Interactive R Package for Viewing, Entering Filtering and Editing Data