xa2multi.pl: reverse sequence and phred if orientations differ between primary and secondary alignment#5

Merged

lh3 merged 1 commit into

tobiasmarschall:master

Sep 7, 2011

Commits on Sep 7, 2011

Bugfix: reverse (complement) sequence and phred string if alternative alignment has different orientation than primary alignment

Tobias Marschall
authored and
Tobias Marschall
committed