Language modeling, protein science, bioinformatics, feature ranking
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University of Delaware
- Newark, DE
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16:09
(UTC -05:00) - https://www.linkedin.com/in/logan-hallee/
- https://orcid.org/0000-0002-0426-3508
- @Logan_Hallee
- https://www.synthyra.com/
- https://www.gleghornlab.com/
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Speedrunning PLM pretraining
Rostlab / ProtTrans
Forked from agemagician/ProtTransProtTrans is providing state of the art pretrained language models for proteins. ProtTrans was trained on thousands of GPUs from Summit and hundreds of Google TPUs using Transformers Models.
OPUS-MaLab / opus_rota5
Forked from thuxugang/opus_rota5OPUS-Rota5: A Highly Accurate Protein Side-chain Modeling Method with 3D-Unet and RotaFormer
The code needed to reproduce the experiments associated with Parkinson et al. 2023 for the xGPR library