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RDKit molecule drawing with Depth of Field (DOF) effects.

Python 5 Updated Dec 21, 2025

This repository contains the code for the paper "Synergy of Machine Learning, Computational Mechanism and Domain Expertise Enables Pd-Catalyzed C–H Asymmetric Alkenylation of Ferrocenophanes".

Jupyter Notebook 1 Updated Oct 21, 2025

[AAAI 2025] Dynamic Protein Data Bank

Python 778 132 Updated Aug 11, 2025

This is repository for "Transfer Learning-Enabled Ligand Prediction for Ni-Catalyzed Atropselective Suzuki-Miyaura Cross-Coupling Based on Mechanistic Similarity: Leveraging Pd Catalysis Knowledge …

Jupyter Notebook 1 1 Updated Jul 18, 2025

E(3) Steerable Graph Neural Network

Python 124 22 Updated Feb 10, 2023
Python 515 87 Updated Feb 23, 2022

This is a repository for the paper entitled "Integrating Multi-Task Graph Neural Network and DFT Calculations for Site-Selectivity Prediction of Arenes and Mechanistic Knowledge Generation"

Jupyter Notebook 8 Updated Aug 15, 2025

Graph Neural Network Library for PyTorch

Python 23,286 3,934 Updated Dec 18, 2025

A beautiful, simple, clean, and responsive Jekyll theme for academics

HTML 14,760 12,626 Updated Dec 17, 2025

This is a repository for paper "Enantioselectivity prediction of pallada-electrocatalysed C–H activation using transition state knowledge in machine learning"

Jupyter Notebook 10 6 Updated Feb 8, 2024

Official implementation of "A unified pre-trained deep learning framework for cross-task reaction performance prediction and synthesis planning"

Jupyter Notebook 31 10 Updated Nov 17, 2025

A SQLModel-based repository dedicated to helping users access the PostgreSQL-based qm9star database more easily in a Python environment.

Jupyter Notebook 13 3 Updated Jun 27, 2025

Dee-seek_project

HTML 1,362 229 Updated Mar 12, 2025

A reinforcement learning library for material and molecule optimization

Python 32 16 Updated Apr 4, 2024
Python 32 6 Updated Jul 19, 2024

[ICLR 2023] "Mole-BERT: Rethinking Pre-training Graph Neural Networks for Molecules"

Python 128 16 Updated Jun 9, 2023

Molecule OPerator, a molecule information extraction and operation unit

Jupyter Notebook 6 1 Updated Dec 21, 2025

An NLP-inspired chemical reaction fingerprint based on basic set arithmetic.

Jupyter Notebook 75 18 Updated Jun 1, 2025

[IJCAI 2023 survey track]A curated list of resources for chemical pre-trained models

535 60 Updated Jun 17, 2023

Chemical reaction data & benchmarks. Extraction and cleaning of data from Open Reaction Database (ORD)

Python 117 12 Updated Jul 14, 2025
Jupyter Notebook 23 4 Updated Dec 4, 2024

Unifying machine learning and quantum chemistry with a deep neural network for molecular wavefunctions

Python 68 21 Updated Sep 17, 2019

Tight Binding Machine Learning Toolkit

Python 44 12 Updated Dec 2, 2025

Δ-QML for medicinal chemistry

Python 105 18 Updated May 5, 2025

QML: Quantum Machine Learning

Python 208 85 Updated Dec 8, 2024
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