Usage: GetORF.py -i <input nucleotide sequence file> -o [output protein sequence file] 
input a nucleotide (DNA or RNA) sequence file, output a protein sequence file containing ORFs found

Options:
  --version             show program's version number and exit
  -h, --help            show this help message and exit
  -i INPUT, --input=INPUT
                        input a nucleotide sequence (DNA/RNA) file for ORFs
                        finding [required]
  -f INFORMAT, --input-format=INFORMAT
                        format of input sequence file,[default: fasta]
  -o OUTPUT, --output=OUTPUT
                        output the result protein sequence file,[default:
                        STDOUT]
  -F OUTFORMAT, --output-format=OUTFORMAT
                        format of output sequence file,[default: fasta]
  -c CODONTABLE, --codon-table=CODONTABLE
                        codon table used when translating,[default: 1]
  -s STRAND, --strand=STRAND
                        translate on plus/minus strand,[default: both]
  -t TYPE, --type=TYPE  input sequence type,DNA or RNA [default: DNA]
  -l LENGTH, --length=LENGTH
                        length thereshold of found ORFs [default: 10]