Stars
Implementation of PocketXMol, the pocket-interacting molecular generative foundation model.
IOBR is an R package to perform comprehensive analysis of tumor microenvironment and signatures for immuno-oncology. https://iobr.github.io/IOBR/
This repository contained single-cell RNA-seq datasets with ICB treated patients
Burn is a next generation tensor library and Deep Learning Framework that doesn't compromise on flexibility, efficiency and portability.
R package to wrap cBioPortal's API to pull data from public or private cBioPortal databases
nextNEOpi: a comprehensive pipeline for computational neoantigen prediction
PhyloVelo, Phylogeny-based transcriptomic velocity of single cells
📦 An R package for accessing genomics data from UCSC Xena platform, from cancer multi-omics to single-cell RNA-seq https://cran.r-project.org/web/packages/UCSCXenaTools/
A pipeline to identify pathogenic microorganisms from scRNA-seq raw data.
A cross-platform and ultrafast toolkit for FASTA/Q file manipulation
This repository hosts a large collection of Nextflow snippets
ChatGPT 中文调教指南。各种场景使用指南。学习怎么让它听你的话。
Shiny server configuration with Nginx load balancer
Construction of a 3D whole organism spatial atlas by joint modeling of multiple slices
A variable-selection oriented LASSO bagging algorithm for biomarker development in omic-based translational research
Metagenomic Intra-Species Diversity Analysis (MIDAS)
A tool to extract LOH blocks from VCF, BAM and FASTA data
Codes and Data for FFPEsig manuscript
ggpie - A ggplot2 extension to create pie, donut and rose pie plot
Repository to host tool-specific module files for the Nextflow DSL2 community!
📄 fullPage.js, pagePiling.js and multiScroll.js for shiny