Starred repositories
A dependency-free large (+2500) collection of colormaps and palettes for Python 🎨
A package for including transposable elements in differential enrichment analysis of sequencing datasets.
A package to count reads mapping on transposable elements subfamilies, families and classes.
Distribution of TEs and their relationship to genes in host genome
Python script calculating transposable element density for all genes in a genome. Publication: https://mobilednajournal.biomedcentral.com/articles/10.1186/s13100-022-00264-4
Create a magnified inset of part of a ggplot object
Profile and Heatmap Visualization by Using ggplot2 and grid
"Paper2Slides: From Paper to Presentation in One Click"
Quick illustration of how one can easily read books together with LLMs. It's great and I highly recommend it.
A curated list of awesome Zotero resources
ggplot extension: options for tailored facets, multiple colourscales and miscellaneous
Regulatory Genomics Toolbox: Python library and set of tools for the integrative analysis of high throughput regulatory genomics data.
Comprehensive TE insertion identification with WGS/WES data from multiple sequencing technics
An interactive cheatsheet tool for the command-line