All Algorithms implemented in Python

Animation engine for explanatory math videos

the only cheat sheet you need

A community-maintained Python framework for creating mathematical animations.

Open source code for AlphaFold 2.

AlphaFold 3 inference pipeline.

Official git repository for Biopython (originally converted from CVS)

Official repository for the Boltz biomolecular interaction models

Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2

☕ BeatPrints, create eye-catching, Pinterest-style music posters effortlessly.

Phylogenetic orthology inference for comparative genomics

Protein-Ligand Interaction Profiler - Analyze and visualize non-covalent protein-ligand interactions in PDB files according to 📝 Schake, Bolz, et al. (2025), https://doi.org/10.1093/nar/gkaf361

ORB forcefield models from Orbital Materials

Collected scripts for Pymol

A dependency-free cross-platform swiss army knife for PDB files.

minimal example implementations for bioinformatics workflow managers

Predict the binding affinity of protein-protein complexes from structural data

A set of tools for manipulating and doing calculations on wwPDB macromolecule structure files

Phylogenetic orthology inference for comparative genomics

Make math animations in a few lines of code.

A simple python CLI tool to fetch weather of any given city.

The overkill theme manager

⚛️ A module for solving and visualizing the Schrödinger equation.

A command-line tool that turns your Git workflow into a fun RPG. Level up, unlock achievements, and make every commit rewarding.

Print randomly from a directory of PNGs to the console by converting it to colored characters.

A simple script to set the theme of the Gnome Desktop in GTK3, GTK4, Qt5 and Qt6, this also will fix Flatpaks theming.

Data files for the molecular modelling course

a TUI designed for hyprland that lets you colorize ascii art with cool effects right in your terminal!

TimSum is a python script that allows users to see their timewarrior's summary more beautifully