Mastodon – a large-scale tracking and track-editing framework for large, multi-view images.

Create 3D/4D animations using a natural language-based syntax

ABBA - Aligning Big Brains and Atlases (2D sections to 3D atlas registration)

ClearVolume is a real-time live 3D visualization library designed for high-end volumetric microscopes such as SPIM and DLSM microscopes. With ClearVolume you can see live on your screen the stacks …

ImgLib2-based viewer for registered SPIM stacks and more

A tool for manual pointwise deformable registration using bigdataviewer.

Software for the reconstruction of multi-view microscopic acquisitions like Selective Plane Illumination Microscopy (SPIM) Data

FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets

browsing large volumetric data and shapes

BigDataViewer-based tool for visualizing multichannel multiscale N5 datasets.

simple standalone BigDataViewer for multiple N5 (or HDF5) datasets

playing with BigVolumeViewer LUTs/gamma/render

ImgLib2-based viewer for registered SPIM stacks and more

making montage or combine tiff images of different sizes

Various demos using imglib2 and bdv