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A list of papers/resources in Survival Analysis that I have read or would like to read.
Circular visualization in Python (Circos Plot, Chord Diagram, Radar Chart)
A high performance parallel lattice-Boltzmann code for large scale fluid flow in complex geometries
MHD-Net: Memory-aware Hetero-modal Distillation Network for Thymic Epithelial Tumor Typing with Missing Pathology Modality
A Python package to make publication-ready but customizable coefficient plots.
The official implementations of our BIBM'24 paper: Focus on Focus: Focus-oriented Representation Learning and Multi-view Cross-modal Alignment for Glioma Grading
TransMIL: Transformer based Correlated Multiple Instance Learning for Whole Slide Image Classification
Integrating histology and spatial transcriptomics - NeurIPS 2024
Together Mixture-Of-Agents (MoA) – 65.1% on AlpacaEval with OSS models
Computational Pathology Toolbox developed by TIA Centre, University of Warwick.
🎨 ML Visuals contains figures and templates which you can reuse and customize to improve your scientific writing.
The source code of 'Diagnose Like A Pathologist: Weakly-Supervised Pathologist-Tree Network for Slide-Level Immunohistochemical Scoring' (AAAI 2021).
Code for the im4MEC model described in the paper 'Interpretable deep learning model to predict the molecular classification of endometrial cancer from haematoxylin and eosin-stained whole-slide ima…
Useful tools for pathology image preprocess
Simple, minimal implementation of the Mamba SSM in one file of PyTorch.
Vision-Language Pathology Foundation Model - Nature Medicine
Pathology Foundation Model - Nature Medicine
Open source tools for computational pathology - Nature BME
⚡ Open-source software for deep learning-based digital pathology
🔬 Code-free deep segmentation for computational pathology
Analysis of 3D pathology samples using weakly supervised AI - Cell
[MICCAI 2024] Official Code for "MambaMIL: Enhancing Long Sequence Modeling with Sequence Reordering in Computational Pathology"
Python script to comvert Philips iSyntax files to OME-TIFF
Docker container for converting files from .isyntax into .ome.tiff