http://www.cs.cornell.edu/~ppn3/gimsan/
-
Install required Python libraries:
sudo pip install -r requirements.txt -
Compile GibbsMarkov and ColumnDependency:
./compile_clean.sh
-
Set and verify GIMSAN job configuration file
conf_examples/test_window_sampling.cfg. Ensure yourgimsan_homeandr_pathdirectory/path are pointing to the correct location. -
Submit GIMSAN job using window-sampling:
./gimsan_submit.py --conf=conf_examples/test_window_sampling.cfg -v -
Generate results and HTML output for GIMSAN job. If parameter
main_output_dir=testout/is set in configuration file, then run:./gimsan_result.py --dir=testout -
Open HTML file
testout/ABF1_YPD_mod/output.html