Config files used to define parameters specific to compute environments at different Institutions

Benchmark for LLM-based Agents in Computational Biology

DeepHyper: A Python Package for Massively Parallel Hyperparameter Optimization in Machine Learning

Repo for the Claude Code Marketplace to use with the Claude for Life Sciences Launch. This will continue to host the marketplace.json long-term, but not the actual MCP servers.

A collection of notebooks/recipes showcasing some fun and effective ways of using Claude.

Code and files for the main nf-core website.

Deep probabilistic analysis of single-cell omics data

Bayesian Modeling and Probabilistic Programming in Python

MiniCPM-Llama3-V 2.5: A GPT-4V Level Multimodal LLM on Your Phone

HiC-Pro: An optimized and flexible pipeline for Hi-C data processing

Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing

Tandem Repeats Caller for LOng Reads

The Fast Cross-Platform Package Manager

Tools for NanoString GeoMx Digital Spatial Profiler data for reading DCC and PKC files to NanoStringGeomxSet class, Normalization and QC.

TensorFlow documentation

R for data science

Documentation for the Google Genomics cookbook.