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Genome modeling and design across all domains of life

Jupyter Notebook 3,258 378 Updated Sep 17, 2025

A modern TLS library in Rust

Rust 7,132 775 Updated Dec 23, 2025

Test data to be used for automated testing with the nf-core pipelines

146 450 Updated Dec 22, 2025

Efficient variant-call data storage and retrieval library using the TileDB storage library.

C++ 99 20 Updated Dec 11, 2025

Scientific workflow engine designed for simplicity & scalability. Trivially transition between one off use cases to massive scale production environments

Scala 1,041 378 Updated Dec 23, 2025

Embeddable genomic visualization component based on the Integrative Genomics Viewer

JavaScript 702 243 Updated Dec 18, 2025

A WDL, CWL and Python API supporting easy-to-use workflow engine. It is scalable, efficient and cross-platform (Linux/macOS).

Python 925 244 Updated Dec 19, 2025

Open Lakehouse Format for Multimodal AI. Convert from Parquet in 2 lines of code for 100x faster random access, vector index, and data versioning. Compatible with Pandas, DuckDB, Polars, Pyarrow, a…

Rust 5,849 502 Updated Dec 23, 2025

Developer-friendly OSS embedded retrieval library for multimodal AI. Search More; Manage Less.

Rust 8,285 675 Updated Dec 23, 2025

Think fearlessly with end-to-end encrypted notes and files. For issues, visit https://standardnotes.com/forum or https://standardnotes.com/help.

TypeScript 6,191 509 Updated Dec 18, 2025

A high-performance, zero-overhead, extensible Python compiler with built-in NumPy support

Python 16,373 581 Updated Dec 23, 2025

A DSL for data-driven computational pipelines

Groovy 3,244 753 Updated Dec 20, 2025

Specification for the Workflow Description Language (WDL).

840 313 Updated Nov 10, 2025

DNAnexus platform client libraries

Python 103 89 Updated Dec 16, 2025
Scala 4 1 Updated Dec 9, 2025

WDL tools for parsing, type-checking, and more

Scala 27 7 Updated Sep 2, 2025

WDL and CWL compiler for the DNAnexus platform

Scala 34 17 Updated Dec 9, 2025
Java 2 Updated Nov 24, 2025