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Using only .snap file from publication for SnapATAC analysis

Status: Open.

#260 In r3fang/SnapATAC;

· Jasminefighter opened on Jan 31, 2024

createGmatFromMat ERROR

Status: Open.

#258 In r3fang/SnapATAC;

· gengbaobao opened on Jan 12, 2024

'CEMBA180305_2B.snap' no snap object in "Integrative Analysis of 10X and snATAC"

Status: Open.

#257 In r3fang/SnapATAC;

· aminbensaad opened on Jan 2, 2024

snapRbind uses defunct function rBind

Status: Open.

#255 In r3fang/SnapATAC;

· imran-aifi opened on Apr 27, 2023

Troubles with homer findknownmotifs.pl

Status: Open.

#254 In r3fang/SnapATAC;

· sanjanabhatnagar opened on Feb 16, 2023

Troubles while creating snap file with bam

Status: Open.

#253 In r3fang/SnapATAC;

· HieuNg1598 opened on Nov 19, 2022

Can we determ the chromatin accessibility for one single cell?

Status: Open.

#252 In r3fang/SnapATAC;

· biozzq opened on Oct 27, 2022

Merging multiple fragment samples

Status: Open.

#251 In r3fang/SnapATAC;

· seoyeonoh12 opened on Sep 18, 2022

Transitioning from v1 to v2 SnapATAC

Status: Open.

#249 In r3fang/SnapATAC;

· mej54 opened on Jul 29, 2022

snaptools for plant genome

Status: Open.

#248 In r3fang/SnapATAC;

· 304243504 opened on Jun 19, 2022

failed to read alignments from BAM

Status: Open.

#247 In r3fang/SnapATAC;

· kunalkathuria opened on Jun 2, 2022

converting signac object to snap atac

Status: Open.

#246 In r3fang/SnapATAC;

· hamidsta opened on May 8, 2022