Stars
IntelliJ IDEA & IntelliJ Platform
Apache Druid: a high performance real-time analytics database.
A fast build system that encourages the creation of small, reusable modules over a variety of platforms and languages.
Apache Beam is a unified programming model for Batch and Streaming data processing.
The missing bridge between Java and native C++
Google Cloud Client Library for Java
Official code repository for GATK versions 4 and up
Support alternative markup for Apache Maven POM files
Jar Jar Links is a utility that makes it easy to repackage Java libraries and embed them into your own distribution.
Integrative Genomics Viewer. Fast, efficient, scalable visualization tool for genomics data and annotations
Markdown language support for IntelliJ IDEA (abandonned).
Bash and shell script language support for JetBrains IDEs. Please refer to www.bashsupport.com/news/bashsupport-pro-1.3/ for the reasons.
Language-agnostic pretty-printing through machine learning (uh, like, is this possible? YES, apparently).
Distributed code search and refactoring for Java
Libraries and tools for interoperability between Hadoop-related open-source software and Google Cloud Platform.
DeepDSL is a domain specific language (DSL) embedded in Scala for writing deep learning network applications.
Hadoop-BAM is a Java library for the manipulation of files in common bioinformatics formats using the Hadoop MapReduce framework
An export of https://code.google.com/p/jarjar/ @ svn:r142 for pants tool use and further development.
A library for manipulating bioinformatics sequencing formats in Apache Spark
This repository implements converters and tools for working with NGS data in HPC or Hadoop cluster