Code and data accompanying McGee et al. "Improving the accuracy of bulk fitness assays by correcting barcode processing biases." bioRxiv (2023).

Benchmark Generator for Community Detection Validation

Bayesian estimation of Rt (C code)

A simple package for simulations of microbial growth experiments with realistic sources of error.

Models of SEIRS epidemic dynamics with extensions, including network-structured populations, testing, contact tracing, and social distancing.

Some of our developing models to predict the effect of mitigation strategies on the spread of SARS-CoV-2

Neuro_AI_Hackathon

🔺 Ternary plotting library for python with matplotlib

Python study group depository