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eri-intro Public
Forked from MattBixley/eri-introAgResearch eResearch Infrastruture Demo
R GNU General Public License v3.0 UpdatedJul 9, 2025 -
High-quality-genomes Public
Forked from GenomicsAotearoa/High-quality-genomesThis repository aims to hosting workflows/codes that have been developed for GA high-quality-genome projects.
Jupyter Notebook UpdatedJan 31, 2025 -
Nextflow_Workshop Public
Forked from GenomicsAotearoa/Nextflow_WorkshopA workshop to help you integrate Nextflow in your analysis workflows for reproducible and scalable pipelines.
HTML GNU General Public License v3.0 UpdatedNov 27, 2023 -
GenomicsAotearoa.github.io Public
Forked from GenomicsAotearoa/GenomicsAotearoa.github.ioCode and files for Genomics Aotearoa github.io website
UpdatedNov 14, 2023 -
snakepipes Public
Forked from maxplanck-ie/snakepipesCustomizable workflows based on snakemake and python for the analysis of NGS data
Python MIT License UpdatedMay 17, 2023 -
human_genomics_pipeline Public
Forked from ESR-NZ/human_genomics_pipelineA Snakemake workflow to process single samples or cohorts of paired-end sequencing data (WGS or WES) using trim galore/bwa/GATK4/parabricks.
Python UpdatedNov 3, 2022 -
hpc-intro Public
Forked from nesi/hpc-introLesson materials for an Introduction to High Performance Computing in the tradition of Software Carpentry
Vim Snippet Other UpdatedFeb 21, 2022 -
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snpGBS Public
Forked from AgResearch/snpGBSA simple bioinformatics workflow to identify single nucleotide polymorphism (SNP) from Genotyping-by-Sequencing (GBS) data.
Shell UpdatedJan 18, 2021 -
KGD Public
Forked from AgResearch/KGDKinship (genetic relatedness) using GBS (genotyping-by-sequencing) with Depth adjustment
R GNU General Public License v2.0 UpdatedAug 16, 2020 -
filebutler Public
Forked from tesujimath/filebutlerUtility for finding and pruning old files in huge directory trees.
Python GNU General Public License v3.0 UpdatedMar 19, 2020 -
GUSMap Public
Forked from tpbilton/GUSMapGenotyping Uncertainty with Sequencing data and linkage MAPping
R GNU General Public License v3.0 UpdatedJan 28, 2019 -
do_user_scripts Public
Forked from digitalocean/do_user_scriptsShell MIT License UpdatedOct 13, 2017 -
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mro Public
Forked from nbrgraphs/mroCreating Effective Graphs with Microsoft R Open
R Other UpdatedDec 13, 2016 -
spreadsheet-ecology-lesson Public
Forked from datacarpentry/spreadsheet-ecology-lessonThis repository contains Data Carpentry lessons on using spreadsheets for data wrangling.
HTML Other UpdatedJun 30, 2016 -
OpenRefine-ecology-lesson Public
Forked from datacarpentry/OpenRefine-ecology-lessonLesson on OpenRefine for ecology
HTML Other UpdatedJun 23, 2016 -
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git-novice Public
Forked from swcarpentry/git-noviceSoftware Carpentry introduction to Git for novices.
HTML Other UpdatedJun 21, 2016 -
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2016-01-28-training-prep Public
Forked from carpentry-instructor-training/2016-01-28-training-prepUpdatedJan 26, 2016 -
BBS_Meeting_2015 Public
Forked from biospectrabysequencing/BBS_Meeting_2015Programme, notes, slides etc. related to BBS meeting prior to MapNet2015
Other UpdatedNov 12, 2015 -
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datasharing Public
Forked from jtleek/datasharingThe Leek group guide to data sharing
UpdatedOct 25, 2015
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