Rust library to program hardware performance counter.

Tearing through FASTA/Q sequences

FMSI is a highly memory efficient exact k-mer set index based on masked superstrings and the masked Burrows-Wheeler transform

A crate for mucking around with piles of bytes

Ensure NEON or AVX2 is available during compilation.

AirPods liberated from Apple's ecosystem.

Annotates genes on putative phage contigs with protein orthologous groups using PHROGs

Easy flamegraphs for Rust projects and everything else, without Perl or pipes <3

PtrHash minimal perfect hash function

Blazing fast concurrent HashMap for Rust.

A lightweight platform-accelerated library for biological motif scanning using position weight matrices.

An efficient CLI to extract sequences from the SRA

A crate to help you go wide. By which I mean use SIMD stuff.

A fast bump allocation arena for Rust

Simple and transparent support for compressed files.

Fast, Cache-Efficient, and Scalable Queries on Pangenomes

A crate for managing memory bit by bit

Extremely fast and accurate Nanopore demultiplexing

Succinct Data Structures for Rust

Complex numbers for Rust

A simple bitset container for Rust

plane sweep filtering genome alignments

A tool for generating consensus long-read assemblies for bacterial genomes

🐎 A fast implementation of the Aho-Corasick algorithm using the compact double-array data structure in Rust.

Fast approximate string searching

A high efficiency binary format for sequencing data

Visualize Ownership and Lifetimes in Rust

easy simd

The Easiest Rust Interface for Local LLMs and an Interface for Deterministic Signals from Probabilistic LLM Vibes

Fast and memory-efficient clustering