Python Basics: A Practical Introduction to Python 3

cortex lab code for electrophysiology

A curated list of awesome Neuropixels resources.

Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days

Code samples for my book "Neural Networks and Deep Learning"

phy: interactive visualization and manual spike sorting of large-scale ephys data

Code to reproduce analysis from El-Gaby et al "A Cellular Basis for Mapping Behavioural Structure"

Computations and statistics on manifolds with geometric structures.

Code for the NIPS 2018 paper: "Stimulus domain transfer in recurrent models for large scale cortical population prediction on video"

Mesoscale activity ephys ingest schema

DataJoint pipeline for IBL project

Library to perform Slice Tensor Component Analysis (sliceTCA)

A python package that includes many methods for decoding neural activity

An introduction to the practicing neuroscientist to data analysis in Python

Models of Mouse Vision: Self-supervised pre-trained networks and training code (PyTorch)

Python code for interacting with the Open Ephys GUI

PYthon Neural Analysis Package 🍍

Schemata and libraries for ingesting and clustering Neuropixel data

Code to train and analyze multi-region data-constrained RNNs and perform Current-Based Decomposition (CURBD)

Getting started materials for DataJoint - with Calcium Imaging, Electrophysiology, Machine Learning examples