Stars
Fastest library to load data from DB to DataFrames in Rust and Python
Tool for deep mutational scanning experiments.
A generative AI extension for JupyterLab
JupyterLab desktop application, based on Electron.
Working with molecular structures in pandas DataFrames
Carrier Infinity Integration for Home Assistant
High-throughput framework for running molecular simulations for METL
Pretrained METL models with minimal dependencies
💻 Ability to rename desktop spaces on macOS 10.10+
Mutational Effect Transfer Learning (METL) framework for pretraining and finetuning biophysics-informed protein language models
Neural networks for deep mutational scanning data
Next-level academia! Repository for the Native Overleaf project, attempting to integrate Overleaf with native OS features for macOS, Linux and Windows.
An open-source ChatGPT app with a voice
A small library for automatical adjustment of text position in matplotlib plots to minimize overlaps.
Listing of papers about machine learning for proteins.
Feature extraction made simple with torchextractor
A playbook for systematically maximizing the performance of deep learning models.
Simple easy to use module to get the intermediate values/activations from chosen Pytorch submodules. Supports submodule annidation and sequential modules.
Drop-in replacement for argparse with added support for config files and environment variables.
A PyTorch Lightning extension that accelerates and enhances foundation model experimentation with flexible fine-tuning schedules.
Code for the CIKM20 Short Paper: "The Impact of Negative Relevance Judgments on NDCG"
OCR, Archive, Index and Search: Implementation agnostic OCR framework.
Official repository for the paper "Tranception: Protein Fitness Prediction with Autoregressive Transformers and Inference-time Retrieval"
The AI developer platform. Use Weights & Biases to train and fine-tune models, and manage models from experimentation to production.