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Releases: seppinho/haplogrep-cmd

2.4.0

20 Aug 13:35

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  • Update Phylogeny to Phylotree Forensic Update (PT17-FU1)
  • Improved fasta reader
  • Set nomenclature fixes for fasta by default
  • Update command line interface to PicoCLI

2.4.0-rc3

20 Aug 10:55

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2.4.0-rc3 Pre-release
Pre-release
Prepare release v2.4.0-rc3

2.4.0-rc2

17 Aug 16:23

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2.4.0-rc2 Pre-release
Pre-release
  • Improved phylotree version

2.4.0-rc1

16 Aug 12:09

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2.4.0-rc1 Pre-release
Pre-release
  • Including latest phylotree specification

2.3.0

13 Aug 20:32

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  • Update to latest haplogrep-core

2.2.9

25 Sep 12:41

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  • Improved dot file

2.2.6

13 Aug 07:49

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  • Exclude heteroplasmic sites (tagged as Y, R) from the FASTA input file (resulted in score value > 1)
  • Adapt the haplogrep range by excluding N positions included in the FASTA sequence.

2.2.5

06 May 10:18

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  • Fix problems with relative paths

2.2.4

05 May 14:06

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  • Set allowed heteroplasmy level to add them to stable homoplasmic sites

2.2.3

01 May 21:33

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v2.2.3

Prepare release 2.2.3