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simba Public
SimBA (Simple Behavioral Analysis), a pipeline and GUI for developing supervised behavioral classifiers
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Trimmer Public
Forked from virginiavw/TrimmerA simple tool to quickly trim behavioral task videos into trial-based clips, along with manual editing, to aid with pose-estimation and subsequent analysis with the Golden Lab's Simple Behavioral A…
Python BSD 3-Clause "New" or "Revised" License UpdatedJan 27, 2026 -
social-index-nb Public
Marimo notebook-based guide for behavioral analysis leveraging a cumulative Z-score index calculated from input metrics.
Python MIT License UpdatedNov 19, 2025 -
np-ephys Public
Collection of scripts used in the Golden Lab to process electrophysiological recordings, from spike sorting to postprocessing and unit curation.
Jupyter Notebook BSD 3-Clause "New" or "Revised" License UpdatedNov 18, 2025 -
np-utils Public
Collection of utility scripts used in the Golden Lab for electrophysiological experiments.
UpdatedSep 3, 2025 -
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SMART Public
Semi-manual alignment to reference templates (SMART): An open source pipeline in R for whole brain mapping
R UpdatedMar 8, 2022 -
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SMART2 Public
Semi-manual alignment to reference templates (SMART): An open source pipeline in R for whole brain mapping
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SMART-1 Public
Forked from mjin1812/SMARTSemi-manual alignment to reference templates (SMART): An open source pipeline in R for whole brain mapping
R UpdatedJun 12, 2021 -
PytorchGeometricTutorial Public
Forked from AntonioLonga/PytorchGeometricTutorialPytorch Geometric Tutorials
Jupyter Notebook UpdatedApr 23, 2021 -
sphinx-tutorial Public
Forked from ericholscher/sphinx-tutorialAn opinionated tutorial on Sphinx.
Python UpdatedOct 9, 2020 -
DeepLabCut Public
Forked from DeepLabCut/DeepLabCutMarkerless pose estimation of user-defined features with deep learning for all animals, including humans
Python GNU Lesser General Public License v3.0 UpdatedJul 5, 2019 -
wholebrain Public
Forked from tractatus/wholebrainR package for segmentation, registration and generating web-based brain atlases from microscope images
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ClearMap Public
Forked from ChristophKirst/ClearMapClearMap is a python toolbox for the analysis and registration of volumetric data from cleared tissues.
Python GNU General Public License v3.0 UpdatedFeb 27, 2019 -
gdelt2HeaderRows Public
Forked from linwoodc3/gdelt2HeaderRowsA file that contains the schema for GDELT 2.0 Header rows for the Events Database.
UpdatedAug 10, 2018
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