Transcript discovery and quantification with long RNA reads (Nanopores and PacBio)

A set of scripts to automate the download and tracking of assemblies and annotations

A curated list of awesome ggplot2 tutorials, packages etc.

HiCExplorer is a powerful and easy to use set of tools to process, normalize and visualize Hi-C data.

Genome-wide contact analysis using sklearn

Extension of the flexHMM package that implements a phylogenetic HMM.

Code example of METALoci applied to H3K27ac for the Sox9 mouse locus during development (E13.5)

Tool to help in the identification and analysis of genomic gene clusters