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Starred repositories

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Sire Molecular Simulations Framework

C++ 60 15 Updated Nov 4, 2025

My first ever repository, some notebooks useful, others sucks. Topics include file format conversion with obabel, docking with Auto Dock, MD with Charmm GUI and QSAR etc, never expect the format is…

Jupyter Notebook 26 10 Updated Oct 22, 2025

🔥Highlighting the top ML papers every week.

12,051 741 Updated Jul 20, 2025

User-friendly extensions of the DrugBank database

HTML 193 75 Updated May 17, 2019

Container-based installation of pymol, with interaction through the browser via Jupyter notebook

Jupyter Notebook 20 9 Updated May 22, 2019

Examples on how to use Manim

Python 30 12 Updated Jul 11, 2021

Don't worry about DrugBank licensing - write code that knows how to download it automatically

Python 60 10 Updated Feb 10, 2025

Main repository of SageMath

Python 2,056 688 Updated Oct 27, 2025

An interoperable Python framework for biomolecular simulation.

Python 130 19 Updated Nov 3, 2025

Python bindings for llama.cpp

Python 9,705 1,243 Updated Aug 15, 2025

Dockerfile to generate debian image with python2 and python3 pre-installed

Dockerfile 1 Updated Aug 21, 2020

ChatPDF-GPT is an innovative chat interface application powered by LangChain and OpenAI, allowing users to upload and chat with PDF documents, stored in Pinecone vector database and Supabase storage.

TypeScript 177 36 Updated Oct 9, 2023

Deep Learning Docker Image

Dockerfile 84 11 Updated Oct 6, 2025

Python package and command line tool for epitope prediction

Jupyter Notebook 52 23 Updated Aug 2, 2024

Streamlit Component for rendering Folium maps

Python 566 210 Updated Oct 7, 2025

Write reproducible code for getting and processing ChEMBL

Jupyter Notebook 84 15 Updated Sep 14, 2025

Open-source bioinformatics components for Dash

Python 562 191 Updated Mar 24, 2025

Main InChI repository

C 99 18 Updated Nov 5, 2025

A web app solving Poisson's equation in electrostatics using finite difference methods for discretization, followed by gauss-seidel methods for solving the equations. Dirichlet conditions and charg…

HTML 5 3 Updated Jul 7, 2018

Some Experiments with QLearning

HTML 2 2 Updated Jul 7, 2018

Conway's Game of Life

HTML 1 2 Updated Aug 2, 2017

An interactive for visualizing complex functions based on a 3Blue1Brown video and also estimation of Riemann Zeta Function using Euler Maclaurin Summation.

HTML 18 7 Updated Mar 10, 2019

general GTO integrals for quantum chemistry

C 236 88 Updated Aug 17, 2025

Interesting resources related to XAI (Explainable Artificial Intelligence)

R 840 140 Updated May 31, 2022

JSME Molecule Editor ipywidget for jupyter notebook

CSS 12 1 Updated Jul 5, 2025

OFFICIAL: AnteChamber PYthon Parser interfacE

Python 238 56 Updated Jun 10, 2025

Emacs support library for PDF files.

C 745 108 Updated Jul 17, 2024

Display images and gifs in your terminal.

Go 326 15 Updated Jun 23, 2025

🍨 Soothing pastel theme for (Neo)vim

Lua 6,930 312 Updated Nov 1, 2025

Find the best vim colorschemes around

TypeScript 956 56 Updated Oct 27, 2025
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