Fast, sensitive and accurate integration of single-cell data with Harmony

Graph based multi genome aligner

Hackathon team: gene expression analysis for Covid-19

A tool for Racon polishing of miniasm assemblies

An alignment-free, reference-free and incremental data structure for colored de Bruijn graph with application to pan-genome indexing.

Single-cell Transcriptome and Regulome Analysis Pipeline

A very fast interval tree data structure

H.E.L.E.N. (Homopolymer Encoded Long-read Error-corrector for Nanopore)

[MOVED] Moved to paoloshasta/shasta. De novo assembly from Oxford Nanopore reads