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an R package which converts markdown files (.md, .Rmd) into mindmaps (brainstorms)

R 578 49 Updated Nov 22, 2021

SumatraPDF reader

C 15,856 1,869 Updated Nov 20, 2025

Readest is a modern, feature-rich ebook reader designed for avid readers offering seamless cross-platform access, powerful tools, and an intuitive interface to elevate your reading experience.

TypeScript 15,788 850 Updated Dec 23, 2025

A tiny (803KB) but mighty timer in pure C. Supports clock, countdown, stopwatch, Pomodoro, and fully customizable tray animations (GIFs, CPU/Mem%).

C 3,598 143 Updated Dec 20, 2025

Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

3,611 1,062 Updated Oct 23, 2025

The AI Scientist-v2: Workshop-Level Automated Scientific Discovery via Agentic Tree Search

Python 1,905 368 Updated Dec 19, 2025

Now, Stronger AI Pushes Frontiers, Stronger Our Shared Future.

269 21 Updated Nov 25, 2025

Benchmark for LLM-based Agents in Computational Biology

Python 67 13 Updated Oct 6, 2025

Composite scoring of gene set activity by integrating AUCell, UCell, singscore, ssGSEA, and AddModuleScore. Supports Seurat objects and expression matrices for robust single-cell and bulk transcrip…

R 2 Updated Dec 22, 2025

Scissor package

C++ 245 41 Updated May 10, 2024

The integration of single cell rank-based gene set enrichment analysis

R 140 22 Updated Jul 6, 2025
Jupyter Notebook 12 3 Updated May 14, 2025

⛳ GO-terms Semantic Similarity Measures

R 66 23 Updated Dec 15, 2025

An R toolkit for estimation of cell composition from bulk expression data

R 80 17 Updated Jun 13, 2025

A Fully Bayesian Inference of Tumor Microenvironment composition and gene expression

HTML 216 58 Updated May 29, 2025
R 6 2 Updated Feb 7, 2025

Machine learning-based integrative analysis develops an immune-derived lncRNA signature for improving clinical outcomes in colorectal cancer

R 125 48 Updated May 30, 2025

使用TCGA的数据进行ceRNA分析和练习

PostScript 3 1 Updated Aug 31, 2022

Pipeline for exploring metebolic heterogeneity at single-cell resolution

R 74 47 Updated Feb 17, 2020

cBioPortal for Cancer Genomics

Java 911 772 Updated Dec 23, 2025

Python script to download the entire NHANES dataset from the CDC website

Python 17 11 Updated Oct 20, 2017
Jupyter Notebook 96 13 Updated Jun 16, 2025

生信爱好者周刊(每周日发布)

HTML 457 30 Updated Dec 15, 2025
R 25 7 Updated Feb 20, 2025

📖 R 语言数据分析实战(写作中) Data Analysis in Action Using R

TeX 89 19 Updated Oct 26, 2025

📦R包:Make TCGA download and prepare easy!

R 149 21 Updated Sep 19, 2025

A book covering the fundamentals of data visualization

HTML 3,414 745 Updated Jul 27, 2022

所有小初高、大学PDF教材。

Roff 63,180 14,013 Updated Oct 18, 2025

微信公众号文章批量下载工具,支持评论、合集下载,支持保存html/mhtml/md/pdf/docx文件,保存文章内图片、视频、音频文件

HTML 6,197 627 Updated Dec 20, 2025
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