Docs for QBiC pipelines

Experimental plugin to integrate GPT like prompt into Nextflow

Assembly and binning of metagenomes

Benchmarking of metagenomic classifiers

🚀 A sequencing simulator

ganon2 classifies genomic sequences against large sets of references efficiently, with integrated download and update of databases (refseq/genbank), taxonomic profiling (ncbi/gtdb), binning and hie…

A collection of scripts to recreate historical RefSeq versions

Bracken (Bayesian Reestimation of Abundance with KrakEN) is a highly accurate statistical method that computes the abundance of species in DNA sequences from a metagenomics sample.

OPAL: Open-community Profiling Assessment tooL

A pipeline for structural clustering of RNA secondary structures

Tools for handling Unique Molecular Identifiers in NGS data sets

Repository for Data Science Issues in Understanding Protein-RNA Interactions

RNA-seq workflow using STAR and DESeq2

RNA-seq aligner

A tool to identify CLIP-seq peaks

iCount, protein-RNA interaction analytics

Git mirror for the SeqAn project.