Lists (2)
Stars
An agent-managed museum exhibit, built in Rust with Gajae-Code / LazyCodex — developed and maintained with no human intervention.
A list of policies by different open source projects about how to engage with AI-generated contributions.
Paper2Agent is a multi-agent AI system that automatically transforms research papers into interactive AI agents with minimal human input.
Pipeline for harmonising immunological receptor–epitope interactions
Vizualize your protein dataset in 2D space
💫 Toolkit to help you get started with Spec-Driven Development
Cookiecutter for making MCPs that we can plug into LLMs, agents, etc
TextAttack 🐙 is a Python framework for adversarial attacks, data augmentation, and model training in NLP https://textattack.readthedocs.io/en/master/
Fast, secure, and practical Python sandbox designed specifically for safely executing code generated by LLMs
A modern cookiecutter template for Python projects that use uv for dependency management
Example of how to build services that use named pipes FIFO as I/O
A repo containing lessons used in pyOpenSci training.
Minimal reproduction of DeepSeek R1-Zero
A Python package to assess and improve fairness of machine learning models.
👁️🗨️ Scientists often do the same bad stuff. Automate giving deterministic feedback during peer review with determinstic (LLM-free)
Comparing performance across many methodological dimensions among tools that predict RNA after TF knockdowns and overexpression.
An integrated graph system of biological entities, functional terms, and publications.
Framework for orchestrating role-playing, autonomous AI agents. By fostering collaborative intelligence, CrewAI empowers agents to work together seamlessly, tackling complex tasks.
Structured data extraction, instruction calling and agentic workflows with ML, LLM and Vision LLM
Easy integration of heterogeneous iterable data within Semantic Knowledge Graphs databases.
Swap GPT for any LLM by changing a single line of code. Xinference lets you run open-source, speech, and multimodal models on cloud, on-prem, or your laptop — all through one unified, production-re…
[Nature Reviews Bioengineering🔥] Application of Large Language Models in Medicine. A curated list of practical guide resources of Medical LLMs (Medical LLMs Tree, Tables, and Papers)
The advanced implementation for BioChatter, using Next.js