-
VideoMetamaterials Public
Forked from jhbastek/VideoMetamaterialsImplementation of 'Inverse-design of nonlinear mechanical metamaterials via video denoising diffusion models'
Python MIT License UpdatedDec 12, 2023 -
SquiggleKit Public
Forked from Psy-Fer/SquiggleKitSquiggleKit: A toolkit for manipulating nanopore signal data
Python MIT License UpdatedFeb 16, 2023 -
PiSCAT Public
Forked from SandoghdarLab/PiSCATPiSCAT is a python-based package with a graphical user interface for performing high-performance analysis on a variety of iSCAT measurements.
Jupyter Notebook GNU General Public License v3.0 UpdatedFeb 16, 2023 -
-
NanoSim Public
Forked from bcgsc/NanoSimNanopore sequence read simulator
Python Other UpdatedDec 14, 2022 -
nanopolish_mRNA-1273 Public
Forked from LRB-IIMCB/nanopolish_mRNA-1273_BNT162b2Nanopolish polya-moderna for the identification of terminal pentamer in the mRNA-1273 direct RNA sequencing data
C++ MIT License UpdatedDec 5, 2022 -
MagneticTweezers Public
Forked from brauchilab/MagneticTweezersA single-molecule manipulation instruments that utilize a magnetic field to apply force to a biomolecule-tethered magnetic bead.
C++ MIT License UpdatedMar 17, 2022 -
tidy3d-notebooks Public
Forked from flexcompute/tidy3d-notebooksCollection of examples and tutorials for the Tidy3D solver by Flexcompute Inc
Jupyter Notebook MIT License UpdatedDec 8, 2021 -
picasso Public
Forked from jungmannlab/picassoA collection of tools for painting super-resolution images
Python MIT License UpdatedSep 18, 2021 -
nanocompore_paper_analyses Public
Forked from tleonardi/nanocompore_paper_analysesAnalyses performed for the nanocompore paper
Jupyter Notebook MIT License UpdatedAug 26, 2021 -
master_of_pores Public
Forked from biocorecrg/master_of_poresNextflow pipeline for analysis of direct RNA Nanopore reads
HTML MIT License UpdatedAug 6, 2021 -
SLM-3dPointCloud Public
Forked from ppozzi/SLM-3dPointCloudPython library for generating 3d point cloud holograms, with phase only spatial light modulators, in real time through a GPU implementation of 5 algorithms (Random superposition, Gerchberg-Saxton, …
Python GNU General Public License v3.0 UpdatedJun 29, 2021 -
matplotlib_for_papers Public
Forked from jbmouret/matplotlib_for_papersHandout for the tutorial "Creating publication-quality figures with matplotlib"
Python Other UpdatedMay 20, 2021 -
UNCALLED Public
Forked from skovaka/UNCALLEDRaw nanopore signal mapper that enables real-time targeted sequencing
C++ MIT License UpdatedApr 14, 2021 -
jetson_nanopore_sequencing Public
Forked from sirselim/jetson_nanopore_sequencingA place to collate notes and resources of our journey into porting nanopore sequencing over to accessible, portable technology.
UpdatedApr 7, 2021 -
stepfinder Public
Forked from tobiasjj/stepfinderStepfinder: A Python package to find steps in one dimensional data with low SNR
Python Apache License 2.0 UpdatedMar 24, 2021 -
readfish Public
Forked from LooseLab/readfishRead Until scripts
Python GNU General Public License v3.0 UpdatedMar 12, 2021 -
compressive-sensing-Gerchberg-Saxton Public
Forked from csi-dcsc/compressive-sensing-Gerchberg-SaxtonSoftware implementation of multiple algorithms for the generation of 3D optogenetics photostimulation patterns with phase-only spatial light modulators
Python GNU General Public License v3.0 UpdatedFeb 10, 2021 -
spins-b Public
Forked from stanfordnqp/spins-bPhotonic optimization library
-
Porcupine Public
Forked from uwmisl/PorcupinePorcupine is a molecular tagging system to tag physical objects with DNA.
Jupyter Notebook Other UpdatedJan 22, 2021 -
-
LDPC_DNA_storage Public
Forked from shubhamchandak94/LDPC_DNA_storageLDPC codes for Illumina sequencing-based DNA storage
C MIT License UpdatedDec 2, 2020 -
hedges Public
Forked from shulp2211/hedgesHEDGES Error Correcting Code for DNA
C++ UpdatedOct 6, 2020 -
read_until_api_v2 Public
Forked from LooseLab/read_until_api_v2Python3 Read Until API implementation
Python Mozilla Public License 2.0 UpdatedMar 11, 2020 -
Multiple-constrained-phase-retrieval Public
Forked from wxwang0104/Multiple-constrained-phase-retrievalThis repository contains a solution to multiple constrained phase retrieval problem.
MATLAB UpdatedAug 11, 2019 -
objective-first Public
Forked from JesseLu/objective-firstObjective-first approach to nanophotonic design, implemented in Matlab
MATLAB UpdatedJul 3, 2018 -
HMM Public
Forked from sjfleming/HMMHidden Markov models for biological time-series data, implemented from scratch in Matlab
MATLAB UpdatedMay 11, 2018 -
BerkeleyPhotonicInverseDesign Public
Forked from sbyrnes321/BerkeleyPhotonicInverseDesignContinuous Adjoint Optimization with Lumerical, developed at UC Berkeley
MATLAB MIT License UpdatedMay 11, 2018 -
DataAcquisition Public
Forked from sjfleming/DataAcquisitionMATLAB graphical user interface for viewing and recording data using a National Instruments DAQ, tested specifically for the NI USB-6003.
MATLAB UpdatedApr 27, 2018 -
NanoporeCode Public
Forked from sjfleming/NanoporeCodeCode to analyze nanopore data in the Golovchenko lab.
MATLAB UpdatedApr 6, 2018
{{ message }}