Skip to content

Pull requests: snakemake/snakemake

New pull request New
83 Open 1,782 Closed
83 Open 1,782 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Reviews
Filter by reviews
No reviews Review required Approved review Changes requested
Assignee
Filter by who’s assigned
Assigned to nobody Loading
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Pull requests list

fix: Compiled workflow.include should carry print_compilation keyword
#2469 opened Oct 4, 2023 by kennyworkman Loading…
1 of 2 tasks
6
feat: Add support for Nix Flakes through nix develop
#2453 opened Sep 20, 2023 by GuilloteauQ • Draft
1 of 2 tasks
@GuilloteauQ
10
add support for oci registry as storage remote
#2358 opened Jul 15, 2023 by vsoch Loading…
1 of 2 tasks
1
2
feat: add native support for execution on AWS Batch
#2324 opened Jun 27, 2023 by wleepang Loading…
2 tasks
9
example for configuration profiles and slurm executation
#2227 opened Apr 21, 2023 by psteinb Loading…
1
feat: Sql remote
#2194 opened Mar 27, 2023 by baffelli Loading…
7
feat: global benchmark options
#2176 opened Mar 17, 2023 by SichongP Loading…
2 tasks done
70
feat: Adding option to redirect shell stdout and stderr to log files
#2100 opened Feb 7, 2023 by dfm Loading…
2 tasks done
3
feat: Proper recursive naming of rules and construction of prefixes in nested modules
#2094 opened Feb 5, 2023 by jotelha Loading…
2 tasks done
9
feat: Indicate a file of conflict when locking workflow fails
#2028 opened Dec 21, 2022 by koen-vg Loading…
2 tasks done
6
feat: Add CITATION.cff
#2025 opened Dec 20, 2022 by mwtoews Loading…
13
feat: added support for micromamba frontend
#2013 opened Dec 14, 2022 by charmoniumQ Loading…
2 tasks done
1
25
feat: Make temp() configurable
#1969 opened Nov 15, 2022 by gshiba Loading…
2 tasks done
3
4
feat: take SNAKEMAKE_CONDA_PREFIX env var.
#1965 opened Nov 11, 2022 by bsmith89 Loading…
2 tasks done
3
docs: Explain how to get scattergather.split value
#1963 opened Nov 7, 2022 by SultanOrazbayev Loading…
2 tasks done
1
6
feat: Add Filelist cache for azure blob storage
#1955 opened Nov 4, 2022 by bioinformaticsbejo Loading…
2 tasks done
4
feat: add dhall to allowable configuration filetypes
#1924 opened Oct 20, 2022 by ndwarshuis Loading…
2 tasks done
8
feat: add oncompletion handler
#1796 opened Aug 6, 2022 by SultanOrazbayev Loading…
2 tasks done
2
feat: support for direct inclusion of vega/vega-lite in reports (given as .vl.json or .vg.json)
#1747 opened Jun 27, 2022 by johanneskoester Loading…
2 tasks
2
chore(deps): bump GoogleCloudPlatform/github-actions from 0.2.1 to 0.6.0 dependencies Pull requests that update a dependency file
#1740 opened Jun 27, 2022 by dependabot bot Loading…
3
fix: added minimal tests for Paramspace
#1676 opened May 23, 2022 by psteinb Loading…
2 tasks done
1
@johanneskoester
11
feat: Support activating amendments in PEP
#1639 opened May 6, 2022 by SichongP Loading…
2 tasks done
1
4
test: test to evaluate pipelines that using modules that them self use modules.
#1625 opened May 2, 2022 by Smeds Loading…
1 of 2 tasks
4
feat: add remote plugin system
#1551 opened Mar 31, 2022 by hwalinga Loading…
2 tasks
11
chore: add testcase for issue #1460
#1531 opened Mar 29, 2022 by johanneskoester Loading…
2 tasks done
6
ProTip! Adding no:label will show everything without a label.