around somewhere
A software engineer @ brainlife.io. Making supercomputers more accessible for researchers and scientists.
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brainlife.io @ Indiana University
- Bloomington, Indiana
- https://soichi.us
- @soichih
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written in MATLAB
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Method for encoding brain connectomes in multidimensional arrays (tensors).
Build structural brain networks using diffusion-weighted MRI, tractography and a brain atlas for cortical and subcortical parcellation.
Runs vistasoft/dtiInit to preprocess and register dwi to anat/t1
Creating standalone MATLAB application - Hello World
Classifies streamlines into known anatomical tracts.
LiFE (Linear Fasicle Evaluation) predicts the measured diffusion signal using the orientation of the fascicles present in a connectome. LiFE uses the difference between the measured and predicted d…