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An active paper-reading skill that reconstructs author reasoning, explains methods mechanistically, stress-tests assumptions, and generates follow-up research ideas.
Constrained Decoding of Diffusion LLMs with Context-Free Grammars.
Scaling diffusion-based molecular generation from mass spectra at training and inference time
An Atomically Complete Tokenizer for Molecular Foundation Models
LiTENexus: An End-to-End Virtual Drug Discovery System Based on Quantum Chemical Grounding
SMILES Pair Encoding: A data-driven substructure representation of chemicals
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GenMol is a generative AI model for creating novel molecules. It utilizes masked discrete diffusion and fragment-based generation to create valid molecules, which are encoded in the SAFE molecular …
FAIR Chemistry's library of machine learning methods for chemistry
LLM Architecture Gallery source data
Official Codebase for "Neural Thickets: Diverse Task Experts Are Dense Around Pretrained Weights" (ICML 2026 Spotlight)
omo/lazycodex: The coding agent for tokenmaxxers;the one and only agent harness for complex codebases. For your Codex, for your OpenCode
Sutskever 30 implementations inspired by https://papercode.vercel.app/ | For Agents, use https://github.com/pageman/Sutskever-Agent | Polyglot / Multi-Backed version at https://github.com/pageman/s…
Code for the paper "NovoMolGen: Rethinking Molecular Language Model Pretraining"
An interactive attention visualization and intervention tool for LLM Decode Stage.
PyTorch Lightning + Hydra. A very user-friendly template for ML experimentation. ⚡🔥⚡
Official PyTorch implementation for ICLR2025 paper "Scaling up Masked Diffusion Models on Text"
Official PyTorch implementation for "Large Language Diffusion Models"
Source code for ICLR2025 paper "NExT-Mol: 3D Diffusion Meets 1D Language Modeling for 3D Molecule Generation".
CellWhisperer bridges the gap between transcriptomics data and natural language, enabling intuitive interaction with scRNA-seq datasets
The Family of Diffusion Protein Language Models (DPLM)
Pymol-open-source wheels for Python on Windows.
A high-performance, GPU-accelerated library for key computational chemistry tasks, such as molecular similarity, conformer generation, and geometry relaxation.