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google-deepmind / alphafold3

AlphaFold 3 inference pipeline.

Python 7,355 1,045 Updated Dec 16, 2025

Bruce-ywj / ERNIE-RNA

Code of a structure-enhanced RNA language model named ERNIE-RNA

Python 32 8 Updated Nov 19, 2025

xiezhq / ISEScan

A python pipeline to identify IS (Insertion Sequence) elements in genome and metagenome

Python 100 16 Updated Dec 5, 2025

evolgeniusteam / EvolviewDocumentation

Documentation for Evolview

29 16 Updated Nov 27, 2021

evo-design / evo

Biological foundation modeling from molecular to genome scale

Jupyter Notebook 1,463 179 Updated Nov 19, 2025

facebookresearch / esm

Evolutionary Scale Modeling (esm): Pretrained language models for proteins

Python 3,909 758 Updated Feb 7, 2024

salesforce / progen

Official release of the ProGen models

Python 686 130 Updated Aug 4, 2023