Skip to content
View themantho's full-sized avatar

Block or report themantho

Block user

Prevent this user from interacting with your repositories and sending you notifications. Learn more about blocking users.

You must be logged in to block users.

Maximum 250 characters. Please don't include any personal information such as legal names or email addresses. Markdown supported. This note will be visible to only you.
Report abuse

Contact GitHub support about this user’s behavior. Learn more about reporting abuse.

Report abuse
Showing results

Helper functions for processing REDCap data in R

R 9 5 Updated Jul 22, 2025

R utilities for interacting with REDCap

R 132 49 Updated Dec 15, 2025

PREVENT-AD open dataset organized in BIDS format

2 2 Updated Jan 15, 2025

[LORIS] PREVENT-AD Registered Dataset

2 2 Updated Jan 15, 2025

R interface to the ANTs biomedical image processing library

R 138 35 Updated Nov 18, 2025

DICOM to NIfTI conversion, NIfTI tools

MATLAB 102 46 Updated Dec 12, 2025

Validator for the Brain Imaging Data Structure

TypeScript 28 21 Updated Dec 18, 2025

An ADNI to BIDS converter. Selects modalities from a downloaded ADNI dataset and organizes the following BIDS specifications,converting all dicom images to nifti.

Python 1 Updated Jun 19, 2023

APPIAN is an open-source automated software pipeline for analyzing PET images in conjunction with MRI. The goal of APPIAN is to make PET tracer kinetic data analysis easy for users with moderate co…

JavaScript 42 18 Updated Aug 23, 2024

Working with Brain Imaging Data Structure in R

R 6 2 Updated Dec 19, 2025

A pipeline for graph theoretical analysis of PET image datasets sourced from ADNI

Jupyter Notebook 6 2 Updated Dec 8, 2022

A very small toolbox for working with data from the Parkinson's Progression Markers Initiative (PPMI)

Python 20 10 Updated Jun 21, 2021

Row-oriented workflows in R with the tidyverse

R 423 42 Updated Dec 29, 2018

Brainconn - an R package for visualising brain connectivity data in 2D and interactive 3D

R 63 8 Updated Sep 18, 2025

defacing utility for MRI images

Python 131 44 Updated Jan 18, 2024

DICOM to NIfTI/BIDS validation script for direct fieldmaps

Shell 2 Updated Jun 28, 2022

Multiplex Network Analysis Library

R 9 3 Updated Mar 17, 2019

Repository containing a code for network analyses of longitudinal working memory training data with multi-session fMRI scanning.

Jupyter Notebook 14 4 Updated Mar 28, 2022

A pipeline for the construction and multilayer motif analysis of temporal fMRI brain networks

Python 8 5 Updated Sep 18, 2024

A python wrapper for the pocket api.

Python 350 36 Updated May 22, 2023

Export/access your Pocket data, including highlights!

Python 205 16 Updated Jul 23, 2025

Atomic tee

Python 37 3 Updated Aug 10, 2024

A guide to writing an amazing readme for your data science project.

12 10 Updated Feb 22, 2023

Univariate and mass-univariate linear mixed-effects analysis for FreeSurfer imaging data.

R 8 1 Updated Jan 22, 2025

Code for the paper "Estimating Head Motion from MRI", which predicts motion scores directly from MRI images.

Python 4 2 Updated Mar 22, 2024

HIPSTA - a python package for hippocampal shape and thickness analysis

Python 6 1 Updated Dec 15, 2025
Python 2 Updated Nov 11, 2024

A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data

Python 71 16 Updated Dec 15, 2025
Python 2 1 Updated Feb 18, 2022
Next