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  • Illumina Inc
  • Miami, Florida

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@TransBioInfoLab

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🀫 Create Chicklet (Rounded Segmented Column) Charts

HTML 184 12 Updated Jul 6, 2022

A curated list 📄 of awesome 🌟 R packages 🌟 (WORK IN PROGRESS)

36 8 Updated Feb 4, 2021

Ready to print calendars with ggplot2

R 276 38 Updated Sep 5, 2025

Tools to convert Illumina IDAT/BPM/EGT/GTC and Affymetrix CEL/CHP files to VCF

C 162 26 Updated Feb 26, 2026

Convolutional neural network analysis for predicting DNA sequence activity.

Jupyter Notebook 267 107 Updated Sep 14, 2020

Foundation Models for Genomics & Transcriptomics

Jupyter Notebook 884 95 Updated Feb 24, 2026

An open-source framework for detecting, redacting, masking, and anonymizing sensitive data (PII) across text, images, and structured data. Supports NLP, pattern matching, and customizable pipelines.

Python 8,626 1,098 Updated Jun 7, 2026

CellBender is a software package for eliminating technical artifacts from high-throughput single-cell RNA sequencing (scRNA-seq) data.

Python 401 87 Updated May 6, 2026

Genetic Algorithm approach to optimizing stock portfolios. This project was developed during the first semester of 2024 for the Combinatorial Optimization elective (ME824) at Unicamp.

C++ 2 Updated Jul 12, 2024

A slimmed down version of scran, based on the C++ library of the same name.

R 10 Updated Oct 15, 2024

Code and plots for submissions to the #tidytuesday challenge

JavaScript 791 114 Updated Jun 14, 2026

Gene set variation analysis

R 245 43 Updated Jun 15, 2026

R package that helps create and export ggplot2 charts in the style used by the BBC News data team

R 1,631 272 Updated Jul 2, 2021

ggplot2 tech themes, scales, and geoms

R 396 60 Updated Aug 7, 2019

Bring projects, wikis, and teams together with AI. AppFlowy is the AI collaborative workspace where you achieve more without losing control of your data. The leading open source Notion alternative.

Dart 72,437 5,477 Updated Jun 5, 2026

Code to reproduce TNBC analysis and figures

R 24 10 Updated Jun 13, 2022

Official repo for the #tidytuesday project

HTML 8,208 2,575 Updated Jun 15, 2026

Light-weight system monitor for X, Wayland, and other things, too

C++ 8,385 660 Updated Jun 15, 2026

Linux System Optimizer and Monitoring - https://oguzhaninan.github.io/Stacer-Web

C++ 9,288 626 Updated Feb 10, 2024

A comprehensive and exhaustive resource for algorithms in all languages and versions.

Java 20 7 Updated Apr 24, 2022

Repository for Short Course: Deep Learning in Omics

HTML 17 4 Updated Jan 13, 2022

ClusterMap is an R package to analyze and compare two or more single cell expression datasets.

R 21 11 Updated Jan 17, 2023

Color palette package in R inspired by works at the Metropolitan Museum of Art in New York

R 1,256 88 Updated Jan 3, 2025

Shiny support for powerful Fomantic UI library.

R 511 97 Updated Dec 2, 2025

All projects in the topic awesome scraped by See Urchin and post-processed by Firm.Watch AI/ML Filters

73 15 Updated May 15, 2020

shiny API for Framework7 (IOS/android)

R 421 77 Updated Jun 13, 2026

ChromSCape

R 14 8 Updated Jul 30, 2025

QFeatures and scp Bioc2021 workshop

R 3 1 Updated Aug 12, 2021

workshop platform provider for running docker containers on kubernetes

Python 19 3 Updated Sep 14, 2021
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