Haplotype VCF comparison tools

Toolset for SV simulation, comparison and filtering

Genome browser and variant annotation

Graph realignment tools for structural variants

Efficient variant-call data storage and retrieval library using the TileDB storage library.

vcfdist: Accurately benchmarking phased variant calls

Eurorack Module Designs, often based on popular designs but modified to be even more...escalative.

simple viewer for variant call format using htslib

Method to optimally select samples for validation and resequencing

a C++ API of htslib to be easily integrated and safely used. More importantly, it can be callled seamlessly in R/Python/Julia etc.

Single-header C++ library for fast/low-memory VCF (Variant Call Format) parsing.

Genotype likelihood simulator for VCF/BCF files

Convert structural variants to sequence graphs [ VCF + FASTA ---> GFA ]

BioC++ Input/Output library

Outputs alignment coverage over a predefined set of variants

`libtiledbvcf` And TileDB-VCF CLI For `R` Package Usage

VCF module conversion into RLZ

Metalnx Micro Services for iRODS

This repo contains CPP scripts to perform certain tasks

summarize and visualize the genotypes categories per sample in a VCF file