Repository to propose and discuss lineages
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Dec 20, 2025 - Python
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virus-genomes
Here are 8 public repositories matching this topic...
A nf-core pipeline for untargeted whole genome reconstruction with iSNV detection from metagenomic samples.
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Dec 12, 2025 - Nextflow
A GLUE project for Hepatitis C virus (HCV)
docker bioinformatics-databases drug-resistance antiviral-resistance hepatitis-c virus-evolution virus-genomes
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Nov 27, 2024 - F*
Place to discuss mpox virus sequences
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Jan 20, 2024
Web application for HBV-GLUE
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Feb 6, 2022 - HTML
Code of the article that describes the molecular epidemiology analyses of OsHV-1 virus by whole genome sequencing approaches in French shellfish growing areas.
bioinformatics r genome analysis metagenomics bioinformatics-pipeline academic-project shell-scripts academic-paper virology ngs-analysis phylogenetic-analysis genomes-comparison molecular-epidemiology virus-genomes
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Feb 18, 2022 - Shell
Code repository associated with Brierley et al., 'An AI for AI..'
machine-learning genomics influenza zoonotic-disease influenza-virus avian-influenza virus-genomes zoonotic-pathogens
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Nov 17, 2025 - R
Extension to HCV-GLUE - contains all published HCV data from NCBI, plus analysis logic for HCV genomes.
bioinformatics microbial-genomics viral-genomics bioinformatics-databases antiviral-resistance hepatitis-c virus-evolution virus-genomes
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Dec 20, 2025 - JavaScript
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